|
|
A table that displays the current molecular data contained in the Protein Databank listed by experimental method.
Returns a Query Results page with all current holdings in the PDB archive. The Query Refinement box near the top of that page provides "drill-down" charts and links that aim to give an insight of the main characteristics of the PDB entries. (See help for Query Refinements.)
A chart that illustrates the status of unreleased entries.
Provides a list of structures that are likely to be proteins that were solved by multiple experimental methods (X-ray, NMR, or EM). The list was generated by clustering PDB protein chains of at least 100 amino acids into clusters of greater than 95% sequence similarity, and then listing only those clusters which contain at least one structure solved by one method (e.g. X-ray) and at least one structure solved by a different method (e.g. NMR).
As the single worldwide repository for macromolecular structures, the Protein Data Bank holds a body of data that contains considerable redundancy in regard to both sequence and structure. We have incorporated into the query interface the ability to select a subset of structures from which similar sequences have been largely removed.
A histogram that displays the resolution of structural data contained in the PDB irrespective of the experimental method used.
A histogram showing the distribution of R free of released structures in the PDB.
This histogram displays the Hermann-Mauguin Space Group Distribution within the structures stored in the PDB.
A histogram showing the distribution of released structures in the PDB by the organism from a natural source (macromolecule was isolated from this organism).
A histogram showing the distribution of released structures in the PDB by the organism from a genetically manipulated source (genetic origin was from this organism).
A histogram illustrating the content with respect to scientific publication.
A histogram showing the number of released entries in the PDB from each of the Structural Genomics Center.
A histogram showing the distribution of released structures in the PDB by the molecular weight of the structures.
A histogram showing shows the distribution of released structures in the PDB by the molecular weight of molecular entities (macromolecule chains, small molecules, ions, water, etc.).
A histogram showing the distribution of released structures in the PDB by the number of residues in macromolecules.
A histogram showing the distribution of released structures in the PDB by the number of atoms in the structures.
A histogram showing the distribution of released structures in the PDB by the enzyme commission number.
Displays a bar chart of the yearly growth of total structures in the PDB.
Note: Hover mouse over chart to get actual values.
A chart that shows the yearly growth of structures solved by X-ray crystallography.
Note: Hover the mouse over the chart to get actual values.
A chart that shows the yearly growth of structures solved using NMR.
Note: Hover the mouse over the chart to get actual values.
A chart that shows the yearly growth of structures solved using Electron Microscopy.
Note: Hover the mouse over the chart to get actual values.
Displays the growth of protein structure submissions to the PDB.
Displays the growth of DNA structure submissions to the PDB.
Displays the growth of RNA structure submissions to the PDB.
Displays the growth of submissions of protein-nucleic acid complexes to the PDB.
Chart showing the growth of unique folds as defined by SCOP.
Chart showing the growth of unique folds per year as defined by CATH.
Chart showing the growth of unique superfamilies as defined by SCOP.
Chart showing the growth of unique superfamilies per year as defined by CATH.