Sequence Similarity Clusters for the Entities in PDB 6BMF

Entity #1 | Chains: A,B,C,D,E
Vacuolar protein sorting-associated protein 4 protein, length: 337 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 14868
95 % 6 6 4689
90 % 6 6 4714
70 % 6 6 4620
50 % 7 7 4163
40 % 10 10 3128
30 % 29 71 478
Entity #2 | Chains: G
Vps2p protein, length: 10 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures