Sequence Similarity Clusters for the Entities in PDB 5VVF

Entity #1 | Chains: H
354BG1 Heavy Chain protein, length: 251 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 2 27260
95 % 1 2 22785
90 % 1 2 22119
70 % 606 2299 2
50 % 1258 4752 1
40 % 1258 4752 1
30 % 1398 5606 1
Entity #2 | Chains: L
354BG1 Light Chain protein, length: 214 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 2 27915
95 % 1 2 23255
90 % 1 2 22495
70 % 613 2346 1
50 % 1259 4752 1
40 % 1259 4752 1
30 % 1399 5606 1

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures