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29-mer fragment of human srp rna helix 6
 
 
DOI:10.2210/pdb1d4r/pdb   NDB ID: AR0024
1D4R
 
Primary Citation
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  •  
    Move Section Related Citations in PDB Entry (REMARK 1) Hide
     
     
  •  
    Move Section Molecular Description Hide
    Classification: RNA
    Structure Weight: 28649.62
     
    Molecule:29-MER OF MODIFIED SRP RNA HELIX 6
    Polymer:1Type:polyribonucleotideLength:29
    Chains:A
    Fragment:NON-NATIVE DUPLEX
    Mutation:C28U
    Molecule:29-MER OF MODIFIED SRP RNA HELIX 6
    Polymer:2Type:polyribonucleotideLength:29
    Chains:B, C
    Fragment:NON-NATIVE DUPLEX
    Mutation:C28U
     
     
  •  
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    Polymer: 1
    Scientific Name: Synthetic construct Go to NCBI Taxonomy entry  
    Polymer: 2
    Scientific Name: Synthetic construct Go to NCBI Taxonomy entry  
     
     
  •  
    Move Section Ligand Chemical Component Hide
    Identifier Name Formula Interaction View Links
    MG     MAGNESIUM ION Mg 3DLigand Explorer Link out to Ligand Expos:MG Link out to SuperLigands:MG Link out to SuperHapten:MG
     
     
  •  
    Move Section Modified Residues Hide
    Identifier Name Formula Interaction View Links
    GDP     GUANOSINE-5'-DIPHOSPHATE (parent: G)(type: rnaLinking) C10 H15 N5 O11 P2 Link out to Ligand Expos:GDP Link out to SuperLigands:GDP Link out to SuperHapten:GDP
    A23     ADENOSINE-5'-PHOSPHATE-2',3'-CYCLIC PHOSPHATE (parent: A)(type: rnaLinking) C10 H13 N5 O9 P2 Link out to Ligand Expos:A23 Link out to SuperLigands:A23 Link out to SuperHapten:A23
     
     
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< Biological Assembly 1    Help >
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Biological assembly 1 assigned by authors
 
 
 
  •  
    Move Section Deposition Summary Hide
    Authors:   Wild, K.,   Weichenrieder, O.,   Leonard, G.A.,   Cusack, S.

    Deposition:   1999-10-05
    Release:   1999-12-02
    Last Modified (REVDAT):   2009-02-24
     
     
  •  
    Move Section Experimental Details Hide
    Method:   X-RAY DIFFRACTION
    Experimental Data:   Download Structure Factors  [ EDS External Link to EDS ]
    View a histogram of Resolution Resolution[Å]: 2.00
    R-Value: 0.264 (obs.)
    R-Free: 0.288
    Space Group: P 31 2 1
    Unit Cell:
      Length [Å] Angles [°]
    a = 42.98 α = 90.00 
    b = 42.98 β = 90.00 
    c = 231.42 γ = 120.00