Phe-tRNA, elongation factoR EF-TU:GDPNP ternary complex     DOI:10.2210/pdb1ttt/pdb   NDB ID: PTR012

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Primary Citation       Related Citations in PDB Entry (REMARK 1) Hide       Molecular Description Hide Classification: Complex (elongation Factor/trna) Structure Weight: 211115.40   Molecule: TRANSFER RIBONUCLEIC ACID (YEAST, PHE) Polymer: 1 Type: polyribonucleotide Length: 76 Chains: D, E, F Other Details: TERNARY COMPLEX WITH GUANOSINE-5'-(BETA,GAMMA-IMIDO) TRIPHOSPHATE (GDPNP) Molecule: OF ELONGATION FACTOR TU (EF-TU) Polymer: 2 Type: polypeptide(L) Length: 405 Chains: A, B, C       Source Hide Polymer: 1 Scientific Name: Synthetic construct   Polymer: 2 Scientific Name: Thermus aquaticus         Ligand Chemical Component Hide Identifier Name Formula Interaction View Links GNP     PHOSPHOAMINOPHOSPHONIC ACID-GUANYLATE ESTER C10 H17 N6 O13 P3 Ligand Explorer MG     MAGNESIUM ION Mg Ligand Explorer PHE     PHENYLALANINE C9 H11 N O2 Ligand Explorer       Modified Residues Hide Identifier Name Formula Interaction View Links 2MG     2N-METHYLGUANOSINE-5'-MONOPHOSPHATE (parent: G)(type: rnaLinking) C11 H16 N5 O8 P Ligand Explorer H2U     5,6-DIHYDROURIDINE-5'-MONOPHOSPHATE (parent: U)(type: rnaLinking) C9 H15 N2 O9 P Ligand Explorer M2G     N2-DIMETHYLGUANOSINE-5'-MONOPHOSPHATE (parent: G)(type: rnaLinking) C12 H18 N5 O8 P Ligand Explorer OMC     O2'-METHYLYCYTIDINE-5'-MONOPHOSPHATE (parent: C)(type: rnaLinking) C10 H16 N3 O8 P Ligand Explorer OMG     O2'-METHYLGUANOSINE-5'-MONOPHOSPHATE (parent: G)(type: rnaLinking) C11 H16 N5 O8 P Ligand Explorer YYG     4-(3-[5-O-PHOSPHONORIBOFURANOSYL]-4,6-DIMETHYL-8-OXO-4,8-DIHYDRO-3H-1,3,4,5,7A-PENTAAZA-S-INDACEN-YLAMINO-BUTYRIC ACID METHYL ESTER (parent: G)(type: rnaLinking) C21 H29 N6 O12 P Ligand Explorer PSU     PSEUDOURIDINE-5'-MONOPHOSPHATE (parent: U)(type: rnaLinking) C9 H13 N2 O9 P Ligand Explorer 5MC     5-METHYLCYTIDINE-5'-MONOPHOSPHATE (parent: C)(type: rnaLinking) C10 H16 N3 O8 P Ligand Explorer 7MG     7N-METHYL-8-HYDROGUANOSINE-5'-MONOPHOSPHATE (parent: G)(type: rnaLinking) C11 H18 N5 O8 P Ligand Explorer 5MU     5-METHYLURIDINE 5'-MONOPHOSPHATE (parent: U)(type: rnaLinking) C10 H15 N2 O9 P Ligand Explorer 1MA     6-HYDRO-1-METHYLADENOSINE-5'-MONOPHOSPHATE (parent: A)(type: rnaLinking) C11 H18 N5 O7 P Ligand Explorer       Derived Data Hide SCOP Classification v1.75 - (9 Domains) CATH Classification v3.2.0 - (9 Domains) PFAM Classification - (9 Domains) GO Terms - (8 Terms)     Reset Layout

Biological Assembly 1     More Images... View in Jmol Other Viewers close KiNG WebMol QuickPDB FirstGlance Kiosk SimpleViewer Protein Workshop Ligand Explorer Biological assembly 1 assigned by authors and generated by PISA (software) Biological assembly 2 assigned by authors and generated by PISA (software) Biological assembly 3 assigned by authors and generated by PISA (software)         Deposition Summary Hide Authors:   Nissen, P.,   Kjeldgaard, M.,   Thirup, S.,   Polekhina, G.,   Reshetnikova, L.,   Clark, B.F.C.,   Nyborg, J. Deposition:   1995-11-16 Release:   1996-12-23 Last Modified (REVDAT):   2009-04-21       Experimental Details Hide Method:   X-RAY DIFFRACTION Experimental Data:   N/A Resolution[Å]: 2.70 R-Value: 0.206 (work) R-Free: 0.290 Space Group: C 2 Unit Cell:   Length [Å] Angles [°] a = 206.84 α = 90.00  b = 122.35 β = 126.30  c = 151.55 γ = 90.00        Structure Links Hide Molecule of the Month Features: Elongation Factors